Data · study · 2026
A global transcriptome analysis of human dermal fibroblasts upon knockdown of the circular RNAs CircMT-RNR2
Listed in NCBI GEO
In an RNAseq analysis, we have identified CircMT-RNR2 with lower levels in diabetic foot ulcer compared to healthy skin The biological function of CircMT-RNR2 in human dermal fibroblasts during wound repair has not been studied.
Description
To study the genes regulated by CircMT-RNR2, we transfected siRNA into human dermal fibroblasts to knockdown CircMT-RNR2. We performed a global transcriptome analysis of fibroblasts upon circRNA knockdown using Affymetrix arrays.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE301nnn/GSE301636 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301636 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1285861 ncbi.nlm.nih.gov/bioproject/PRJNA1285861 ↗
project · from NCBI GEO
- PubMed 41655237 pubmed.ncbi.nlm.nih.gov/41655237 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by array · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE301636 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |