Omics · study · 2026
RNA sequencing of turbot head kideny neutrophils at 7 day post-training with PBS or β-glucan
Listed in NCBI GEO
This dataset presents RNA sequencing (RNA-seq) analysis of neutrophils isolated from the head kideny of turbots at 7 day post training (7 dpt).
Description
Head kideny tissue from two experimental groups—PBS control group and β-glucan-trained group —was processed to generate neutrophils suspensions. The library was constructed using the NEBNext Ultra™ RNA Library Prep Kit (NEB #E7490) and purified with beads (AMPure XP system).
Sequencing was performed on the NovaSeq 6000 platform with PE150. The genome version used was hg38_V43_gencode. This study represents the neutrophils transcriptional atlas mediated β-glucan training.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE320nnn/GSE320500 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320500 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1428719 ncbi.nlm.nih.gov/bioproject/PRJNA1428719 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE320500 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |