Omics · study · 2026
STAT4 signaling in CD4 T cells is required for optimal Chlamydia muridarum clearance from the female reproductive tract
Listed in NCBI GEO
Although the generation of Chlamydia-specific T helper Type 1 (Th1) responses is thought to be essential for Chlamydia immunity, recent studies have questioned this simple model.
Description
For example, deficiency in T-bet, or the capacity of CD4 T cells to secrete IFN-g, does not affect the rate of Chlamydia clearance from the female reproductive tract (FRT) in a mouse model of infection. Here, we examine the role of CD4 T cells in clearance using a STAT4 f/f model controlled by CD4-Cre. the absence of STAT4 from T cells significantly impaired the ability of infected mice to clear Chlamydia from the FRT.
Single-cell RNA sequencing of STAT4-sufficient CD4 T cells revealed the heightened expression of cytotoxic genes when compared to STAT4-deficient CD4 T cells. Together, these data support a new model where IL-12 signaling via STAT 4STAT4 drives a cytotoxic module associated with Chlamydia immunity.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE341nnn/GSE341839 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341839 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1504317 ncbi.nlm.nih.gov/bioproject/PRJNA1504317 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE341839 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |