Omics · study · 2026
Transcriptome profiling of two novel Mycobacterium species, Mycobacterium camsae and Mycobacterium pumcae
Listed in NCBI GEO
This study performed transcriptome sequencing of two newly identified Mycobacterium species, Mycobacterium camsae and Mycobacterium pumcae, under standard culture conditions to establish baseline gene expression profiles.
Description
RNA was extracted from cells grown to mid-log phase in standard medium and sequenced using Illumina paired-end technology. The data provide a foundational resource for future functional studies of these novel strains.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE328nnn/GSE328954 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328954 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1455423 ncbi.nlm.nih.gov/bioproject/PRJNA1455423 ↗
project · from NCBI GEO
- PubMed 42245512 pubmed.ncbi.nlm.nih.gov/42245512 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE328954 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |