Omics · study · 2026
A rewired myeloid niche in spleen establishes stress erythropoiesis
Listed in NCBI GEO
The bone marrow is responsible for steady-state erythropoiesis.
Description
However, during emergencies, the erythropoietic function can shift to the spleen. It remains unclear how the spleen, which typically performs erythrocyte recycling, can rapidly switch to become a site for erythropoiesis in stress states.
We utilized single-cell sequencing and spatial transcriptomic sequencing to compare changes in myeloid and erythroid cells in the bone marrow and spleen, thereby elucidating the key components of the extramedullary erythropoietic niche. We discovered that inflammation can rewire pre-existing macrophages in the spleen, establishing a novel myeloid microenvironment essential for extramedullary erythropoiesis.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE288nnn/GSE288200 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288200 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1216566 ncbi.nlm.nih.gov/bioproject/PRJNA1216566 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus · Other
- From keywords
- Life Sciences
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE288200 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |