Data · dataset · 2026
Differential regulation of CD8+T cell differentiation states in the tumor immune microenvironment by Batf3 gene deficiency versus cDC1-specific deficiency.
Listed in ScienceDB
Objective BATF3 and TRIM33 are both critical regulators of cDC1 development.
Description
This study comparatively investigates the impact of cDC1 deficiency induced by either global Batf3 knockout (Batf3-/-) or conditional Trim33 knockout in cDC1 (Xcr1CreTrim33f/f) on antitumor immune responses. The aim is to dissect, in the context of Batf3 deficiency, which effects on intratumoral CD8+T cells are specifically mediated by cDC1 deficiency, and which arise from Batf3-dependent alterations in other immune cell populations.
Methods
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Under steady-state conditions, the proportion and number of cDC1 were compared in the lungs and spleens of Trim33f/f(Ctrl), Batf3-/-,and Xcr1CreTrim33f/f mice. A Lewis lung carcinoma (LLC) tumor model was established to monitor tumor growth and analyze the phenotypes of tumor-infiltrating DC and CD8+T cell. Intratumoral CD8+T cells were sorted for bulk RNA sequencing to characterize transcriptional differences.Results Under steady-state conditions,both Batf3-/-and Xcr1CreTrim33f/f mice exhibited a comparable and significant reduction in cDC1 proportion and number in lung and spleen compared with Ctrl,and compared with Ctrl and Xcr1CreTrim33f/f mice, Batf3-/-mice showed exhibited higher proportion and number of central memory CD8+T cells (CD44+CD62L+) in the lymph nodes.
Following lung cancer cell line,LLC implantation,tumor growth was significantly accelerated in both Batf3-/-and Xcr1CreTrim33f/f mice compared with the Ctrl mice,with no statistically significant difference between Batf3-/-and Xcr1CreTrim33f/f groups. However, within intratumoral CD8+T cells, Batf3-/- mice exhibited a reduction in effector CD8+T cells (CD44+), whereas the number of central memory CD8+T cells remains unchanged; however, CD62L expression on these cells was significantly upregulated; in contrast, Xcr1CreTrim33f/f mice showed no significant deviation from Ctrl mice in this regard.
Transcriptomic analysis revealed that, compared with Ctrl mice, both Batf3-/- and Xcr1CreTrim33f/f mice shared downregulated differentially expressed genes (DEGs) enriched in functional pathwaysin CD8+T cell , In addition, DEGs uniquely altered in Batf3-/- mice included downregulation of exhaustion-associated genes (e.g., Tox, Havcr2) and upregulation of memory-associated genes (e.g., Sell/Cd62L).Conclusion BATF3 governs antitumor CD8+T cell immunity through a dual mechanism: (1) a cDC1-dependent axis—where cDC1-mediated antigen presentation is essential for CD8+T cell priming and effector differentiation; and (2) a cDC1-independent axis—where BATF3 intrinsically constrains T cell exhaustion and fosters memory-like differentiation within the tumor microenvironment.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.j00217.12140 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Cancer 75% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.j00217.12140 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |