Omics · study · 2026
Single-cell RNA sequencing of orthotopic pancreasic cancer reveals characterization of tumor microenvironment by treatment of anti-VSIG4 antibodies in KPC cell transplantation mouse model
Listed in NCBI GEO
Immune checkpoint blockade (ICB) therapies, such as PD-1/PD-L1 inhibitors, have revolutionized cancer treatment by reactivating exhausted T cells.
Description
However, their efficacy varies substantially among tumor types and is particularly limited in immunologically “cold” malignancies such as pancreatic ductal adenocarcinoma. These tumors exhibit minimal T-cell infiltration and a profoundly immunosuppressive tumor microenvironment (TME), leading to poor responses to ICB.
VSIG4 is a B7-related transmembrane protein highly expressed by tissue-resident macrophages. Previous studies have shown that VSIG4 suppresses proinflammatory macrophage polarization by modulating pyruvate metabolism and enhances M2-like states via lactate-STAT3 signaling and fatty acid oxidation. VSIG4 also inhibits T-cell activation and proliferation, making it a candidate immune checkpoint molecule.
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Recent work has linked VSIG4⁺ tumor-associated macrophages to T-cell suppression and therapeutic resistance in multiple cancers, although the identity of the T-cell receptor for VSIG4 remains unknown. So we demonstrate that VSIG4 binds SLC3A2 to suppress Gln uptake and disrupt ion homeostasis, thereby impairing T-cell activation. Antibody-mediated VSIG4 blockade restores T-cell function and induces robust antitumor responses, especially in pancreatic cancer models.
These findings define a novel VSIG4–SLC3A2 axis that integrates metabolic and ionic control to suppress immunity, offering a promising strategy to overcome resistance in “cold” tumors.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE307nnn/GSE307934 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307934 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1327849 ncbi.nlm.nih.gov/bioproject/PRJNA1327849 ↗
project · from NCBI GEO
- PubMed 42259604 pubmed.ncbi.nlm.nih.gov/42259604 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE307934 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |