Omics · study · 2026
Single-cell transcriptomic analysis of hepatic immune cells from untreated and ConA-treated mice
Listed in NCBI GEO
Hepatic immune tolerance is essential for maintaining liver homeostasis, but its underlying cellular and molecular mechanisms remain poorly defined.
Description
In this study, we established a low-dose concanavalin A (ConA)-induced immune tolerance model in mice and performed single-cell RNA sequencing (scRNA-seq) on hepatic immune cells isolated from untreated (UT) and ConA-treated groups. Transcriptomic profiling revealed substantial remodeling of the hepatic immune microenvironment following low-dose ConA stimulation.
Notably, we observed a pronounced activation of type II immune responses, characterized by enrichment of Th2-associated cytokine signatures and expansion of Th2, Tfh subsets. Further analysis identified B cells as potential key contributors to this process, exhibiting distinct transcriptional programs associated with humoral immunity that may play a role in the establishment of immune tolerance.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE325nnn/GSE325124 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325124 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1438671 ncbi.nlm.nih.gov/bioproject/PRJNA1438671 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE325124 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |