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Table · dataset · 2026

Processed single-nucleus RNA sequencing data from hearts of Coxsackievirus A6 (CVA6)-infected wild-type and Ifnar1-deficient mice

Listed in ZivaHub and HKU DataHub and figshare and Loughborough Research Repository and UP Research Data Repository — shown once because both records carry DOI 10.6084/m9.figshare.33960628.v1

<p dir="ltr">This dataset contains processed single-nucleus RNA sequencing (snRNA-seq) data generated from heart tissues of coxsackievirus A6 (CVA6)-infected wild-type (WT) and Ifnar1-deficient mice.

Description

Heart tissues were collected at 5 days post-infection (dpi). Six independent biological samples were included, comprising three CVA6-infected WT mice and three CVA6-infected Ifnar1-deficient mice, with each mouse representing an independent biological replicate.</p><p dir="ltr">The deposited files contain sample-specific processed single-nucleus gene expression count matrices.

These data were used to characterize major cardiac cell populations and to investigate genotype-associated differences in interferon-related and antiviral transcriptional states across cardiac cell populations.</p><p dir="ltr">The corresponding raw sequencing data are being deposited in a public sequence repository and will be made available under the relevant accession number.</p>

Links

Where it is published

Catalogue records · 1

Topics

Inferred from text
RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 65%
Provenance · 5 source records, 63 field assertions
SourceKeyLast seenRaw
ZivaHuboai:figshare.com:article/339606285 d agoJSON v1
HKU DataHuboai:figshare.com:article/339606285 d agoJSON v1
figshareoai:figshare.com:article/339606284 d agoJSON v1
Loughborough Research Repositoryoai:figshare.com:article/339606284 d agoJSON v1
UP Research Data Repositoryoai:figshare.com:article/339606283 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[anatomy].local:anatomy:heartmapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['heart']
concepts[anatomy].local:anatomy:heartmapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['heart']
concepts[anatomy].local:anatomy:heartmapping · figshare comvocabulary-mapper@1.0.0keywords['heart']
concepts[anatomy].local:anatomy:heartmapping · datahub hku hkvocabulary-mapper@1.0.0keywords['heart']
concepts[anatomy].local:anatomy:heartmapping · researchdata up ac zavocabulary-mapper@1.0.0keywords['heart']
concepts[field].anzsrc:field:310204mapping · researchdata up ac zavocabulary-mapper@1.0.0keywords['Genomics and transcriptomics']
concepts[field].anzsrc:field:310204mapping · datahub hku hkvocabulary-mapper@1.0.0keywords['Genomics and transcriptomics']
concepts[field].anzsrc:field:310204mapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['Genomics and transcriptomics']
concepts[field].anzsrc:field:310204mapping · figshare comvocabulary-mapper@1.0.0keywords['Genomics and transcriptomics']
concepts[field].anzsrc:field:310204mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Genomics and transcriptomics']
concepts[field].anzsrc:field:310509mapping · figshare comvocabulary-mapper@1.0.0keywords['Genomics']
concepts[field].anzsrc:field:310509mapping · researchdata up ac zavocabulary-mapper@1.0.0keywords['Genomics']
concepts[field].anzsrc:field:310509mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Genomics']
concepts[field].anzsrc:field:310509mapping · datahub hku hkvocabulary-mapper@1.0.0keywords['Genomics']
concepts[field].anzsrc:field:310509mapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['Genomics']
concepts[field].anzsrc:field:320705mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Medical virology']
concepts[field].anzsrc:field:320705mapping · datahub hku hkvocabulary-mapper@1.0.0keywords['Medical virology']
concepts[field].anzsrc:field:320705mapping · figshare comvocabulary-mapper@1.0.0keywords['Medical virology']
concepts[field].anzsrc:field:320705mapping · researchdata up ac zavocabulary-mapper@1.0.0keywords['Medical virology']
concepts[field].anzsrc:field:320705mapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['Medical virology']
concepts[field].local:field:astronomymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:chemistrymapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:chemistrymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:computer-science-aimapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:computer-science-aimapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:earth-environmentalmapping · datahub hku hkconnector:datahub_hku_hk@1.0.0
concepts[field].local:field:earth-environmentalmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:earth-environmentalmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:earth-environmentalmapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:economics-financemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:economics-financemapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:engineeringmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:engineeringmapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:engineeringmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:humanitiesmapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:humanitiesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:humanitiesmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:life-sciencesmapping · datahub hku hkconnector:datahub_hku_hk@1.0.0
concepts[field].local:field:life-sciencesmapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:life-sciencesmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:materials-sciencemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:medicine-healthmapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:medicine-healthmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:medicine-healthmapping · datahub hku hkconnector:datahub_hku_hk@1.0.0
concepts[field].local:field:medicine-healthmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:medicine-healthmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:ocean-atmosphericmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:psychology-behavioralmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:social-sciencemapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:social-sciencemapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:social-sciencemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[modality].local:modality:rna-seqenrichment · zivahub uct ac zakeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · zivahub uct ac zakeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:single-cell-rna-seqenrichment · zivahub uct ac zakeyword-concept-rules@1.0.0title+description (65%)
descriptionsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/description
licensesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/rights
publication_datesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
titlesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/title