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Imaging · study · 2026

Spatial transcriptomics of Slc16a1-Col2a1CreERT2 mouse spinal motion segments reveals compartment-distinct differences in the intervertebral disc

Listed in NCBI GEO

The intervertebral disc is a compartmentalized structure, with an inner nucleus pulposus (NP) surrounding by annulus fibrosus (AF), and bordered superiorly and inferiorly by cartilaginous endplates.

Description

Glucose is known to be the primary energy source for the disc -- in which gets metabolized into lactate. While lactate efflux out of the NP is critical, the fate of lactate is undetermined.

Thus, we've generated Slc16a1-Col2a1CreERT2 mice which inhibit lactate transport into the AF and EP compartments of the disc. We took into an exploratory approach and employed spatial transcriptomics which allowed us to capture positional gene information, including crosstalk between disc compartments, in which otherwise would be lost without spatial sequencing. Our analysis revealed the consequences of long-term MCT1 inhibition in the AF- and endplates on gene expression.

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Topics

Stated by source
Mus musculus · Other
From keywords
Life Sciences
Inferred from text
Sequencing 75%
Provenance · 1 source records, 8 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE28749913 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:othersource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:10090source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title