Omics · study · 2026
Phosphodiesterase 1b (Pde1b) governs development and immune responses of myeloid and lymphoid cells through regulation of cyclic nucleotide-dependent protein kinases
Listed in NCBI GEO
Elevated cAMP and cGMP levels suppress immune functions in antigen presenting cells, while phosphodiesterases enzymatically degrade these cyclic nucleotides to regulate their intracellular concentrations.
Description
This study demonstrates that selective expression of the calcium/calmodulin-dependent phosphodiesterase 1b (Pde1b) in specific dendritic cell (DC) and macrophage subsets is essential for promoting inflammation and adaptive immunity.
Utilizing single-cell RNA sequencing and multiparameter flow cytometry, Pde1b deficiency was found to alter gene expression and protein functions involved in development or immune effector activity in DC, macrophages, granulocytes, B cells, NK cells and memory T cells. In vivo pathogen challenge studies in Pde1b-deficient mice resulted in markedly attenuated pro-inflammatory and antigen-specific T cell responses. Notably, Pde1b-deficient DC and macrophages exhibited elevated cyclic nucleotides levels and enhanced cyclic nucleotide-dependent PKA and PKG activity.
Read the rest (1 more)
These findings establish Pde1b as a pivotal regulator of cyclic nucleotide signaling that shapes immune development and responses.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE297nnn/GSE297611 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE297611 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1265259 ncbi.nlm.nih.gov/bioproject/PRJNA1265259 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE297611 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |