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Omics · study · 2026

Transcriptomic analysis of Bioprinted 3D Lung Spheroid Model Mimicking Tumor Microenvironment

Listed in NCBI GEO

Conventional in vitro and in vivo models often fail to accurately predict clinical outcomes due to their inability to capture the full complexity of the tumor microenvironment (TME).

Description

Existing 3D models also face difficulties in reproducing TME complexity and encounter various engineering limitations. In this study, 3D embedded bioprinting was used to construct a heterogeneous lung spheroid (HLS) model that integrates key stromal factors to more closely simulate the TME.

RNA sequencing–based transcriptomic profiling revealed gene signatures related to extracellular matrix remodeling, immune suppression, and tumor progression, which showed strong resemblance to patient-derived lung tumor samples and supported the model’s biological relevance. In summary, this model reproduces essential characteristics of the lung TME and holds promise as a tool for assessing advanced therapies targeting complex solid tumors.

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Topics

From keywords
Life Sciences
Inferred from text
Cancer 65% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE29844712 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[disease].local:disease:cancerenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:9606source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title