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Omics · study · 2026

Single-nucleus RNA sequencing of brain tissue from HIV-infected and uninfected donors.

Listed in NCBI GEO

This project investigates the molecular and cellular mechanisms that enable HIV persistence within the human brain across distinct infection states.

Description

Postmortem brain tissues from uninfected controls, viremic individuals, and antiretroviral therapy (ART) suppressed people with HIV were dissociated into single-nucleus suspensions and profiled by high-throughput RNA sequencing. The resulting dataset supports the identification of transcriptional reprogramming, immune modulation, and latent viral reservoir signatures associated with HIV-associated neurocognitive disorders (HAND).

Integration of single-nucleus RNA-seq data across these clinical conditions provides a comprehensive atlas of HIV host interactions in the central nervous system.

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From keywords
Life Sciences
Inferred from text
RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 65%
Provenance · 1 source records, 10 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE33100815 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:single-cell-rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
concepts[organism].NCBITaxon:9606source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title