Data · dataset · 2016
The polyadenylation complex of Trypanosoma brucei: Characterization of the functional poly(A) polymerase
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The generation of mature mRNA in the protozoan parasite Trypanosoma brucei requires coupled polyadenylation and trans splicing.
Description
In contrast to other eukaryotes, we still know very little on components, mechanisms, and dynamics of the 3′ end-processing machinery in trypanosomes. To characterize the catalytic core of the polyadenylation complex in T. brucei , we first identified the poly(A) polymerase [Tb927.7.3780] as the major functional, nuclear-localized enzyme in trypanosomes.
In contrast, another poly(A) polymerase, encoded by an intron-containing gene [Tb927.3.3160], localizes mainly in the cytoplasm and appears not to be functional in general 3′ end processing of mRNAs. Based on tandem-affinity purification with tagged CPSF160 and mass spectrometry, we identified ten associated components of the trypanosome polyadenylation complex, including homologues to all four CPSF subunits, Fip1, CstF50/64, and Symplekin, as well as two hypothetical proteins.
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RNAi-mediated knockdown revealed that most of these factors are essential for growth and required for both in vivo polyadenylation and trans splicing, arguing for a general coupling of these two mRNA-processing reactions.
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Where it is published
- Repository landing page tandf.figshare.com/articles/dataset/_b_The_polyadenylation_complex_of_b_i_b_Trypa… ↗
landing page · from DataCite
- Repository landing page figshare.com/articles/_b_The_polyadenylation_complex_of_b_i_b_Trypanosoma_b… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.1632152 ↗
DOI / persistent id · from DataCite
- DOI doi.org/10.6084/m9.figshare.1632152.v2 ↗
DOI / persistent id · from DataCite
Documentation and papers
- Creative Commons Attribution 4.0 International creativecommons.org/licenses/by/4.0/legalcode ↗
license · from DataCite
- IsSupplementTo 10.1080/15476286.2015.1130208 doi.org/10.1080/15476286.2015.1130208 ↗
publication · from DataCite
Catalogue records · 4
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.1632152.v2 ↗
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- DataCite API api.datacite.org/dois/10.6084/m9.figshare.1632152 ↗
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- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.1632152.v2 ↗
catalogue entry · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.1632152 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Biological sciences · Biological sciences · Clinical medicine · Clinical medicine · Earth and related environmental sciences · Earth and related environmental sciences · Physical sciences · Physical sciences
- From keywords
- Medicine & Health · Medicine & Health
- Inferred from text
- Mass spectrometry 75%
Provenance · 2 source records, 19 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.1632152 | 15 d ago | JSON v1 |
| DataCite | 10.6084/m9.figshare.1632152.v2 | 15 d ago | JSON v1 |
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